| Property | Value |
|---|
| Working Groups |  AG Gagneur, AG Schulz |
| Subproject | Z03 |
| Open Access |  Yes |
| Publication Type | Journal Article |
| PMID |  36708003 |
| DOI |  10.1093/bioinformatics/btad062 |
| Publication Year | 2023 |
| Title | The adapted Activity-By-Contact model for enhancer-gene assignment and its application to single-cell data |
| Journal | Bioinformatics |
| ISSN | 1367-4803 |
| URL | http://dx.doi.org/10.1093/bioinformatics/btad062 |
| Authors | Hecker D, Behjati Ardakani F, Karollus A, Gagneur J, Schulz MH |
| First Author | Hecker D |
| Last Author | Schulz MH |
External Resources
github.com/SchulzLab/STAREhttps://github.com/SchulzLab/STARE
Open-source software for enhancer-gene prediction and annotation with transcription factors
zenodo.o...C1XaAkhttps://zenodo.org/record/7351632#.ZBBDbC1XaAk
Zenodo archive with predictions and validation datasets used in the study.
oup.silv...gDrlGahttps://oup.silverchair-cdn.com/oup/backfile/Content_public/Journal/bioinformatics/39/2/10.1093_bioinformatics_btad062/1/btad062_supplementary_data.pdf?Expires=1681845023&Signature=AjZGeVuG52ppFxifLuOq96t9PN~zf495OyIU1IU1rU~DAHTjUG62-EdDcmsQ9PpOzNsHgDrlGa
Supplementary information on gABC score and STARE implementation
